BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A01LP1|AL425612
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1116 1536 0.0
>3x_Contig1116
Length = 5699
Score = 1536 bits (771), Expect = 0.0
Identities = 777/783 (99%)
Strand = Plus / Plus
Query: 1 gatcttcacatctttttgaccatattaaggtccgaactcaacaaaaacgtttcacaccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3667 gatcttcacatctttttgaccatattaaggtccgaactcaacaaaaacgtttcacaccgg 3726
Query: 61 tgtttcctggtcgtgcatatacgacggaagaacttcgaaaggaaaaccagaaaaacatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3727 tgtttcctggtcgtgcatatacgacggaagaacttcgaaaggaaaaccagaaaaacatga 3786
Query: 121 tcatacacgtgatcagaatattccgtagttccttgggcctctcaacactgcyaaaatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3787 tcatacacgtgatcagaatattccgtagttccttgggcctctcaacactgctaaaatgca 3846
Query: 181 cacttcaatattttgatagaacatatatatggacatacacatttctatatgctacctaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3847 cacttcaatattttgatagaacatatatatggacatacacatttctatatgctacctaca 3906
Query: 241 actagcacttatatgctcatcaaagaatctgatggtttgaatacyattgtgtagttcatg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3907 actagcacttatatgctcatcaaagaatctgatggtttgaatactattgtgtagttcatg 3966
Query: 301 cyagatatcactccgttcaagtcgttagtgaaaatccgatcttcaagcactagctgtaat 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3967 ctagatatcactccgttcaagtcgttagtgaaaatccgatcttcaagcactagctgtaat 4026
Query: 361 gagacaccatagtaggtaccccatataggtcttggtttatccagtgatcyactattaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4027 gagacaccatagtaggtaccccatataggtcttggtttatccagtgatctactattaatc 4086
Query: 421 gatccctgacctgggcgggactgtgaatcctgactatttgctggaactgtgcyatcctgg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4087 gatccctgacctgggcgggactgtgaatcctgactatttgctggaactgtgctatcctgg 4146
Query: 481 ccgttcttatccttcccactttcgtcaaatctaactttacagttcacattgcatagtaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4147 ccgttcttatccttcccactttcgtcaaatctaactttacagttcacattgcatagtaag 4206
Query: 541 gttccggtacctggtatcacatggaaatcaaccgcggtgataacgtgctgcgtcagtacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4207 gttccggtacctggtatcacatggaaatcaaccgcggtgataacgtgctgcgtcagtacc 4266
Query: 601 actccagtttgccatgcctgaaggaattgcactgcctgtccaaacggttgggaattgaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4267 actccagtttgccatgcctgaaggaattgcactgcctgtccaaacggttgggaattgaat 4326
Query: 661 atbattttgcactgatgtgggttaaatagctgtaggaattgttccaactttgctggatcg 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4327 attattttgcactgatgtgggttaaatagctgtaggaattgttccaactttgctggatcg 4386
Query: 721 ggctcatctagatgagccagtactttcttcacaaaagtctccacgatttgaggttgacga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4387 ggctcatctagatgagccagtactttcttcacaaaagtctccacgatttgaggttgacga 4446
Query: 781 ttc 783
|||
Sbjct: 4447 ttc 4449
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4379
Number of Sequences: 1807
Number of extensions: 4379
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)